What We Do

Our Research Areas

Six interconnected research domains advancing waste-to-resource biotechnologies. Click any area or use the buttons to explore dedicated pages with full detail, real lab photos, videos, and publications.

Anaerobic Digestion Lab
Anaerobic Digestion
AREA 01 · CORE RESEARCH

Anaerobic Digestion & Microaeration

We investigate microbial consortia in anaerobic digestion to maximize biogas yields from food waste, agricultural residues, and wastewater sludge. Our micro-aeration research has reshaped how the field thinks about H₂S control and methane optimization.

  • High-solids co-digestion of food waste and biosolids
  • Micro-aeration integration for sulfide control
  • Temperature-phased and psychrophilic digestion
  • Digestate valorization and nutrient recovery

Nanobubble Research
Nanobubble Technology — Lab Research
AREA 02 · NOVEL TECHNOLOGY

Nanobubble Technology

Nanobubbles (<200 nm) exhibit extraordinary properties — long residence times, high internal pressure, and ROS generation. We harness these to improve biological treatment, disinfection, and agricultural applications including plant growth enhancement.

  • Oxygen and ozone nanobubble applications
  • Enhanced aerobic biodegradation and disinfection
  • Nanobubble aeration in aquaponics and agriculture
  • Nanobubble technology in anaerobic digestion

Fungal Fermentation Lab
Fungal Fermentation — Bioenergy Research
AREA 03 · ENERGY RESEARCH

Bioenergy & Biofuels

A signature platform uses Rhizopus oligosporus fungal bioprocessing to simultaneously treat distillery stillage and produce value-added fungal biomass protein — earning an R&D 100 Award and IWA Project Innovation Award.

  • Fungal processing of distillery stillage and vinasse
  • Biohydrogen production via dark fermentation
  • Cellulosic and lignocellulosic biomass pretreatment
  • Algae-based biofuel production

Bioreactor
Bioreactor — Gas Fermentation Research
AREA 04 · EMERGING TECHNOLOGY

Gas Fermentation

Gas fermentation uses acetogenic microorganisms to convert CO, CO₂, and H₂ from industrial off-gases into valuable chemicals and fuels. Our hollow-fiber membrane bioreactors overcome the mass transfer limitations of sparingly soluble gases.

  • Syngas fermentation with acetogenic bacteria
  • Bioethanol and acetic acid from CO₂ streams
  • Reactor engineering for mass transfer optimization
  • Integration with industrial carbon capture

Biorefinery Concept
Biorefinery Concept — Resource Recovery
AREA 05 · CROSS-CUTTING

Resource Recovery & Circular Economy

Our biorefinery-inspired approach recovers nutrients, metals, biopolymers, and biochemicals from complex waste streams. Wastes from one process become feedstocks for another — our techno-economic models identify the most commercially viable pathways.

  • Struvite and phosphorus recovery from digestate
  • PHA bioplastic production from VFAs
  • Heavy metal biosorption and bioaccumulation
  • Biorefinery integration and techno-economic modeling

Aquaponics Lab
Aquaponics System · UH Manoa
AREA 06 · APPLIED RESEARCH

Aquaponics Systems

We develop integrated aquaponics systems linking fish cultivation and plant hydroponics. Our decoupled design achieves superior nitrogen utilization and yield, while micro-nanobubble aeration dramatically improves plant growth and nitrification performance.

  • Decoupled aquaponics design and optimization
  • Microbiome dynamics and nitrification efficiency
  • Micro-nanobubble aeration for plant yield enhancement
  • Sustainable urban food production systems
Our Philosophy

Research Approach

Interdisciplinary, systems-thinking science that bridges fundamental discovery with real-world environmental impact.

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Mechanistic Understanding

We go beyond empirical observation to understand the molecular and microbial mechanisms underlying our processes — enabling rational, science-driven optimization.

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Systems Integration

Our biorefinery-inspired approach designs processes where wastes become inputs — creating circular, resource-efficient systems that minimize environmental footprint.

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Global Impact

Through collaborations spanning 50+ countries, we translate laboratory discoveries into scalable, field-ready solutions for developing and developed nations alike.